Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Rnu11-201ENSMUST00000104135 134 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm24888-201ENSMUST00000104387 130 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm8250-201ENSMUST00000117398 774 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm9005-201ENSMUST00000119908 607 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm23896-201ENSMUST00000158109 130 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm8241-201ENSMUST00000189286 816 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm37005-201ENSMUST00000193281 1164 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm18985-201ENSMUST00000196472 1079 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm44075-201ENSMUST00000204208 216 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm18838-201ENSMUST00000204855 886 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm10297-201ENSMUST00000207136 651 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 AC125539.1-202ENSMUST00000226449 670 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm26442-201ENSMUST00000082588 153 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.44□□□□□ -1.22
Vps53Q8CCB4 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.44□□□□□ -1.22
Vps53Q8CCB4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm14733-201ENSMUST00000117680 133 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm15502-201ENSMUST00000121449 208 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm6977-201ENSMUST00000121568 512 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm22820-201ENSMUST00000157205 329 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm9274-201ENSMUST00000182505 984 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm28918-201ENSMUST00000188822 699 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm43850-201ENSMUST00000202021 578 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm2040-201ENSMUST00000202979 289 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 Gm5055-201ENSMUST00000215697 581 ntBASIC7.43□□□□□ -1.22
Vps53Q8CCB4 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps53Q8CCB4 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms