Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm15741-201ENSMUST00000119401 754 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm8317-201ENSMUST00000121261 471 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm36939-201ENSMUST00000194889 439 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm18405-201ENSMUST00000220743 511 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 AC134254.4-201ENSMUST00000223086 370 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm24405-201ENSMUST00000083033 167 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Ap5m1-208ENSMUST00000228238 3514 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm18878-201ENSMUST00000223071 1443 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm38085-201ENSMUST00000195785 3062 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7152-201ENSMUST00000163570 605 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7952-201ENSMUST00000180540 984 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm43116-201ENSMUST00000199789 195 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm29778-201ENSMUST00000201667 466 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm5306-201ENSMUST00000203325 757 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7688-201ENSMUST00000212857 337 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7802-201ENSMUST00000216464 262 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7557-201ENSMUST00000221935 865 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 AC131100.2-201ENSMUST00000227701 998 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Usp40Q8BWR4 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.68□□□□□ -1.02
Usp40Q8BWR4 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm14098-201ENSMUST00000119295 623 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm13818-201ENSMUST00000119441 511 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm15394-201ENSMUST00000119656 1308 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm14908-201ENSMUST00000120930 1286 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm12399-201ENSMUST00000121475 446 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm12396-201ENSMUST00000121600 306 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm15529-201ENSMUST00000121833 994 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm14237-201ENSMUST00000122080 430 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm22599-201ENSMUST00000157597 132 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm24241-201ENSMUST00000157787 145 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm3076-201ENSMUST00000161613 451 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms