Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Nkx3-1P97436 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.46□□□□□ -1.53
Nkx3-1P97436 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.46□□□□□ -1.53
Nkx3-1P97436 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Nkx3-1P97436 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Nkx3-1P97436 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Mir678-201ENSMUST00000102114 84 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm15901-201ENSMUST00000117663 941 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm8855-201ENSMUST00000118888 878 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm14938-201ENSMUST00000119482 943 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm24179-201ENSMUST00000158925 127 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm2996-201ENSMUST00000211398 537 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Gm9292-201ENSMUST00000222008 710 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Mir298-201ENSMUST00000083476 82 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.46□□□□□ -1.54
Nkx3-1P97436 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx3-1P97436 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.46□□□□□ -1.54
Nkx3-1P97436 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm22714-201ENSMUST00000116894 78 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm11533-201ENSMUST00000120287 477 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm25782-201ENSMUST00000122526 289 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm23995-201ENSMUST00000158060 129 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm25433-201ENSMUST00000158283 286 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm22530-201ENSMUST00000158820 118 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm16164-201ENSMUST00000160078 468 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm27854-201ENSMUST00000175578 244 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Mir6367-201ENSMUST00000183385 102 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Mir7653-201ENSMUST00000184358 61 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm8860-201ENSMUST00000193160 445 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm18290-201ENSMUST00000202900 844 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm23238-201ENSMUST00000083007 164 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms