Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ufd1P70362 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ufd1P70362 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.25□□□□□ -1.57
Ufd1P70362 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm26419-201ENSMUST00000104272 133 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm24888-201ENSMUST00000104387 130 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm13193-201ENSMUST00000117275 225 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm12683-201ENSMUST00000117528 415 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm12459-201ENSMUST00000120659 356 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm5135-201ENSMUST00000121100 573 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm14747-201ENSMUST00000149888 984 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.25□□□□□ -1.57
Ufd1P70362 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm23497-201ENSMUST00000157738 130 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm23553-201ENSMUST00000157817 295 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm23259-201ENSMUST00000158318 303 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.25□□□□□ -1.57
Ufd1P70362 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm23632-201ENSMUST00000175289 125 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm27866-201ENSMUST00000184459 171 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm36965-201ENSMUST00000193797 394 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm37585-201ENSMUST00000195440 280 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm2975-201ENSMUST00000209710 820 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 AC154515.3-201ENSMUST00000225081 1159 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 AC139569.1-201ENSMUST00000226080 614 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ufd1P70362 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Gm24621-201ENSMUST00000082679 140 ntBASIC5.25□□□□□ -1.57
Ufd1P70362 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ufd1P70362 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ufd1P70362 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ufd1P70362 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ufd1P70362 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ufd1P70362 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Gm27468-201ENSMUST00000183577 106 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Mir6241-201ENSMUST00000184225 103 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm29201-201ENSMUST00000189120 431 ntBASIC5.24□□□□□ -1.57
Ufd1P70362 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.24□□□□□ -1.57
Ufd1P70362 Gm29592-201ENSMUST00000189434 370 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms