Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HttP42859 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HttP42859 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.32□□□□□ -1.4
HttP42859 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
HttP42859 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm25227-201ENSMUST00000158204 112 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm15970-201ENSMUST00000160623 834 ntBASIC6.32□□□□□ -1.4
HttP42859 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm37272-201ENSMUST00000193401 488 ntBASIC6.32□□□□□ -1.4
HttP42859 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.32□□□□□ -1.4
HttP42859 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HttP42859 AC154828.1-201ENSMUST00000220696 2810 ntBASIC6.32□□□□□ -1.4
HttP42859 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm23553-201ENSMUST00000157817 295 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm24217-201ENSMUST00000158260 133 ntBASIC6.32□□□□□ -1.4
HttP42859 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.32□□□□□ -1.4
HttP42859 Gm28665-201ENSMUST00000189269 670 ntBASIC6.32□□□□□ -1.4
HttP42859 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.32□□□□□ -1.4
HttP42859 Gm18468-201ENSMUST00000207321 369 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm18470-201ENSMUST00000207467 420 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm18465-201ENSMUST00000207468 369 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm18464-201ENSMUST00000207803 420 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm18458-201ENSMUST00000207908 369 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm18461-201ENSMUST00000208421 420 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm8290-201ENSMUST00000218202 477 ntBASIC6.32□□□□□ -1.4
HttP42859 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.32□□□□□ -1.4
HttP42859 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HttP42859 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
HttP42859 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 AC122291.1-201ENSMUST00000228937 5748 ntBASIC6.32□□□□□ -1.4
HttP42859 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm7927-201ENSMUST00000118818 880 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm7973-201ENSMUST00000122107 488 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm12488-201ENSMUST00000122449 499 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm23700-201ENSMUST00000158842 102 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Gm46191-201ENSMUST00000218899 433 ntBASIC6.32□□□□□ -1.4
HttP42859 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.32□□□□□ -1.4
HttP42859 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.32□□□□□ -1.4
HttP42859 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
HttP42859 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HttP42859 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.31□□□□□ -1.4
HttP42859 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.31□□□□□ -1.4
HttP42859 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm14485-201ENSMUST00000119489 493 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm5387-201ENSMUST00000119776 857 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm11677-201ENSMUST00000121349 977 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm7316-201ENSMUST00000165395 445 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm44213-201ENSMUST00000204977 703 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms