Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm14202-201ENSMUST00000120121 311 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm27970-201ENSMUST00000184854 407 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm24706-201ENSMUST00000082806 137 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm3788-201ENSMUST00000119949 136 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm28503-201ENSMUST00000185966 147 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm17934-201ENSMUST00000192818 422 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a3E9PWQ3 Gm5386-201ENSMUST00000121749 2450 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm22807-201ENSMUST00000082737 129 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm5841-201ENSMUST00000195307 2177 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm37416-201ENSMUST00000193596 318 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.95□□□□□ -1.46
Col6a3E9PWQ3 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm45191-201ENSMUST00000205846 5439 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms