Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Odf3b-204ENSMUST00000227834 930 ntBASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Smarcb1Q9Z0H3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.71■□□□□ 0.59
Smarcb1Q9Z0H3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarcb1Q9Z0H3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Timm23-208ENSMUST00000226683 750 ntBASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcb1Q9Z0H3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.68■□□□□ 0.58
Smarcb1Q9Z0H3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms