Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Gm6211-202ENSMUST00000167849 925 ntBASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Mir5133-201ENSMUST00000174955 77 ntBASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClcnkaQ9WUB7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Gm12933-201ENSMUST00000120203 872 ntBASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClcnkaQ9WUB7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ClcnkaQ9WUB7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ClcnkaQ9WUB7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClcnkaQ9WUB7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClcnkaQ9WUB7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Gm13148-201ENSMUST00000118892 745 ntBASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClcnkaQ9WUB7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms