Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Gm18671-201ENSMUST00000214826 683 ntBASIC16.44■□□□□ 0.22
RlimQ9WTV7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.44■□□□□ 0.22
RlimQ9WTV7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RlimQ9WTV7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Gm42642-201ENSMUST00000200683 355 ntBASIC16.43■□□□□ 0.22
RlimQ9WTV7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RlimQ9WTV7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RlimQ9WTV7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RlimQ9WTV7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.41■□□□□ 0.22
RlimQ9WTV7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RlimQ9WTV7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Gm5874-201ENSMUST00000096101 508 ntBASIC16.4■□□□□ 0.22
RlimQ9WTV7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RlimQ9WTV7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RlimQ9WTV7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.39■□□□□ 0.21
RlimQ9WTV7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.39■□□□□ 0.21
RlimQ9WTV7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.39■□□□□ 0.21
RlimQ9WTV7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RlimQ9WTV7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RlimQ9WTV7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
RlimQ9WTV7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms