Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn2Q9R0A1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn2Q9R0A1 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn2Q9R0A1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Gm12933-201ENSMUST00000120203 872 ntBASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn2Q9R0A1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn2Q9R0A1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Nespas-201ENSMUST00000143738 1083 ntBASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn2Q9R0A1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms