Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1aQ9QWF0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1aQ9QWF0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1aQ9QWF0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1aQ9QWF0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Gm13234-201ENSMUST00000120010 747 ntBASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chaf1aQ9QWF0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chaf1aQ9QWF0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chaf1aQ9QWF0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chaf1aQ9QWF0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
Chaf1aQ9QWF0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1aQ9QWF0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms