Protein–RNA interactions for Protein: Q9JIT0

Lmbr1, Limb region 1 protein, mousemouse

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmbr1Q9JIT0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lmbr1Q9JIT0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lmbr1Q9JIT0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lmbr1Q9JIT0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.68■□□□□ 0.9
Lmbr1Q9JIT0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lmbr1Q9JIT0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.66■□□□□ 0.9
Lmbr1Q9JIT0 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Gm22325-201ENSMUST00000158904 308 ntBASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Gm26524-201ENSMUST00000192339 390 ntBASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lmbr1Q9JIT0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lmbr1Q9JIT0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lmbr1Q9JIT0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lmbr1Q9JIT0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmbr1Q9JIT0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms