Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Gm10493-201ENSMUST00000097270 612 ntBASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpxQ9JHS4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpxQ9JHS4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpxQ9JHS4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Fst-202ENSMUST00000223640 2612 ntBASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpxQ9JHS4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.46■□□□□ 0.23
ClpxQ9JHS4 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Gm42778-201ENSMUST00000199644 553 ntBASIC16.46■□□□□ 0.23
ClpxQ9JHS4 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.46■□□□□ 0.23
ClpxQ9JHS4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpxQ9JHS4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ClpxQ9JHS4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ClpxQ9JHS4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
ClpxQ9JHS4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms