Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Gm22325-201ENSMUST00000158904 308 ntBASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3bpQ9EQG9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3bpQ9EQG9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col4a3bpQ9EQG9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.65■□□□□ 0.9
Col4a3bpQ9EQG9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a3bpQ9EQG9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a3bpQ9EQG9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a3bpQ9EQG9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms