Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rsph9Q9D9V4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rsph9Q9D9V4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rsph9Q9D9V4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rsph9Q9D9V4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Mir6982-201ENSMUST00000184354 68 ntBASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rsph9Q9D9V4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph9Q9D9V4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rsph9Q9D9V4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rsph9Q9D9V4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms