Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.2■□□□□ 0.66
Gm3404Q9D506 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm3404Q9D506 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3404Q9D506 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm3404Q9D506 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.18■□□□□ 0.66
Gm3404Q9D506 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.18■□□□□ 0.66
Gm3404Q9D506 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3404Q9D506 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.17■□□□□ 0.66
Gm3404Q9D506 Gm2399-201ENSMUST00000104944 225 ntBASIC19.17■□□□□ 0.66
Gm3404Q9D506 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gm3404Q9D506 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.17■□□□□ 0.66
Gm3404Q9D506 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Gm2559-201ENSMUST00000201323 363 ntBASIC19.16■□□□□ 0.66
Gm3404Q9D506 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm3404Q9D506 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Gm12896-201ENSMUST00000118430 226 ntBASIC19.15■□□□□ 0.66
Gm3404Q9D506 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm3404Q9D506 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gm3404Q9D506 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm3404Q9D506 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3404Q9D506 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.13■□□□□ 0.65
Gm3404Q9D506 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Gm20049-201ENSMUST00000219950 730 ntBASIC19.13■□□□□ 0.65
Gm3404Q9D506 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm3404Q9D506 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms