Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Cfap53Q9D439 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap53Q9D439 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gm12933-201ENSMUST00000120203 872 ntBASIC19.79■□□□□ 0.76
Cfap53Q9D439 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.79■□□□□ 0.76
Cfap53Q9D439 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap53Q9D439 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.79■□□□□ 0.76
Cfap53Q9D439 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.78■□□□□ 0.76
Cfap53Q9D439 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap53Q9D439 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap53Q9D439 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.77■□□□□ 0.75
Cfap53Q9D439 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cfap53Q9D439 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.76■□□□□ 0.75
Cfap53Q9D439 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cfap53Q9D439 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap53Q9D439 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cfap53Q9D439 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cfap53Q9D439 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms