Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Gm13146-201ENSMUST00000118508 780 ntBASIC17.97■□□□□ 0.47
Ssu72Q9CY97 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ssu72Q9CY97 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Gm22325-201ENSMUST00000158904 308 ntBASIC17.96■□□□□ 0.47
Ssu72Q9CY97 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssu72Q9CY97 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ssu72Q9CY97 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.95■□□□□ 0.46
Ssu72Q9CY97 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Gm26833-201ENSMUST00000180899 440 ntBASIC17.95■□□□□ 0.46
Ssu72Q9CY97 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssu72Q9CY97 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Gm13534-201ENSMUST00000121169 513 ntBASIC17.94■□□□□ 0.46
Ssu72Q9CY97 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Gm21956-201ENSMUST00000179946 522 ntBASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Idnk-204ENSMUST00000226010 1898 ntBASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssu72Q9CY97 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gm40848-201ENSMUST00000221998 324 ntBASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gm13241-201ENSMUST00000094493 780 ntBASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssu72Q9CY97 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssu72Q9CY97 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.91■□□□□ 0.46
Ssu72Q9CY97 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms