Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssr1Q9CY50 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssr1Q9CY50 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.53■□□□□ 0.72
Ssr1Q9CY50 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssr1Q9CY50 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ssr1Q9CY50 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.52■□□□□ 0.71
Ssr1Q9CY50 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ssr1Q9CY50 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ssr1Q9CY50 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ssr1Q9CY50 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Gm42778-201ENSMUST00000199644 553 ntBASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssr1Q9CY50 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms