Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Khdc3Q9CWU5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Khdc3Q9CWU5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc3Q9CWU5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.29■□□□□ 0.36
Khdc3Q9CWU5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Gm7290-201ENSMUST00000104990 617 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Gm12918-201ENSMUST00000120234 636 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Gm15710-201ENSMUST00000121821 636 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Gm5075-201ENSMUST00000196916 622 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc3Q9CWU5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc3Q9CWU5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc3Q9CWU5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc3Q9CWU5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms