Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkiras2Q9CR56 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkiras2Q9CR56 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkiras2Q9CR56 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Gm9988-201ENSMUST00000069786 435 ntBASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkiras2Q9CR56 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Nkiras2Q9CR56 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Fst-202ENSMUST00000223640 2612 ntBASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gm7860-201ENSMUST00000121190 879 ntBASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkiras2Q9CR56 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkiras2Q9CR56 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms