Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldnd1Q9CQX5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldnd1Q9CQX5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldnd1Q9CQX5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldnd1Q9CQX5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldnd1Q9CQX5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldnd1Q9CQX5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldnd1Q9CQX5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cldnd1Q9CQX5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldnd1Q9CQX5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldnd1Q9CQX5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms