Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chchd1Q9CQA6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chchd1Q9CQA6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chchd1Q9CQA6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Gm9806-201ENSMUST00000051080 552 ntBASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chchd1Q9CQA6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Gm16437-201ENSMUST00000025669 507 ntBASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chchd1Q9CQA6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms