Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.65■□□□□ 0.42
Trim16Q99PP9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.65■□□□□ 0.42
Trim16Q99PP9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim16Q99PP9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.64■□□□□ 0.41
Trim16Q99PP9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim16Q99PP9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim16Q99PP9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.63■□□□□ 0.41
Trim16Q99PP9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.63■□□□□ 0.41
Trim16Q99PP9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim16Q99PP9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim16Q99PP9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim16Q99PP9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.61■□□□□ 0.41
Trim16Q99PP9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim16Q99PP9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim16Q99PP9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms