Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim33Q99PP7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim33Q99PP7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim33Q99PP7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim33Q99PP7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.88■□□□□ 0.45
Trim33Q99PP7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim33Q99PP7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.87■□□□□ 0.45
Trim33Q99PP7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.87■□□□□ 0.45
Trim33Q99PP7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim33Q99PP7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim33Q99PP7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.86■□□□□ 0.45
Trim33Q99PP7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Trim33Q99PP7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.85■□□□□ 0.45
Trim33Q99PP7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim33Q99PP7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.84■□□□□ 0.45
Trim33Q99PP7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.84■□□□□ 0.45
Trim33Q99PP7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim33Q99PP7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms