Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col25a1Q99MQ5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Gm18025-201ENSMUST00000221733 862 ntBASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col25a1Q99MQ5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col25a1Q99MQ5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col25a1Q99MQ5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Mtag2-201ENSMUST00000058665 714 ntBASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col25a1Q99MQ5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Gm29518-201ENSMUST00000190858 372 ntBASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col25a1Q99MQ5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms