Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc1bQ920F6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc1bQ920F6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.75■□□□□ 0.91
Smc1bQ920F6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.75■□□□□ 0.91
Smc1bQ920F6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.75■□□□□ 0.91
Smc1bQ920F6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.75■□□□□ 0.91
Smc1bQ920F6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc1bQ920F6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Gm5417-201ENSMUST00000079706 384 ntBASIC20.74■□□□□ 0.91
Smc1bQ920F6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Smc1bQ920F6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smc1bQ920F6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.72■□□□□ 0.91
Smc1bQ920F6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Gm21362-201ENSMUST00000194272 928 ntBASIC20.71■□□□□ 0.91
Smc1bQ920F6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc1bQ920F6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Gm10819-201ENSMUST00000099988 561 ntBASIC20.7■□□□□ 0.9
Smc1bQ920F6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Smc1bQ920F6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms