Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb20Q91XZ9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb20Q91XZ9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb20Q91XZ9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb20Q91XZ9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb20Q91XZ9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb20Q91XZ9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb20Q91XZ9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.31■□□□□ 0.36
Pcdhb20Q91XZ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb20Q91XZ9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms