Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.82■□□□□ 0.44
Usb1Q91W78 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usb1Q91W78 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Usb1Q91W78 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.82■□□□□ 0.44
Usb1Q91W78 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Usb1Q91W78 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usb1Q91W78 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.81■□□□□ 0.44
Usb1Q91W78 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Gm26524-201ENSMUST00000192339 390 ntBASIC17.81■□□□□ 0.44
Usb1Q91W78 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.81■□□□□ 0.44
Usb1Q91W78 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.81■□□□□ 0.44
Usb1Q91W78 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usb1Q91W78 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
Usb1Q91W78 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.8■□□□□ 0.44
Usb1Q91W78 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Rab3c-203ENSMUST00000224180 967 ntBASIC17.8■□□□□ 0.44
Usb1Q91W78 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Usb1Q91W78 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.8■□□□□ 0.44
Usb1Q91W78 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Usb1Q91W78 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.8■□□□□ 0.44
Usb1Q91W78 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.8■□□□□ 0.44
Usb1Q91W78 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usb1Q91W78 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.79■□□□□ 0.44
Usb1Q91W78 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.79■□□□□ 0.44
Usb1Q91W78 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.79■□□□□ 0.44
Usb1Q91W78 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.79■□□□□ 0.44
Usb1Q91W78 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.79■□□□□ 0.44
Usb1Q91W78 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usb1Q91W78 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usb1Q91W78 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.78■□□□□ 0.44
Usb1Q91W78 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.78■□□□□ 0.44
Usb1Q91W78 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Gm20760-201ENSMUST00000179197 648 ntBASIC17.78■□□□□ 0.44
Usb1Q91W78 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usb1Q91W78 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Usb1Q91W78 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.77■□□□□ 0.44
Usb1Q91W78 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.77■□□□□ 0.44
Usb1Q91W78 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usb1Q91W78 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Usb1Q91W78 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usb1Q91W78 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms