Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Gm10013-201ENSMUST00000106074 672 ntBASIC17.86■□□□□ 0.45
Vsx1Q91V10 Gm37292-201ENSMUST00000192062 758 ntBASIC17.86■□□□□ 0.45
Vsx1Q91V10 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vsx1Q91V10 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vsx1Q91V10 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Gm33142-201ENSMUST00000193913 867 ntBASIC17.85■□□□□ 0.45
Vsx1Q91V10 Gm10138-203ENSMUST00000206952 366 ntBASIC17.85■□□□□ 0.45
Vsx1Q91V10 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.85■□□□□ 0.45
Vsx1Q91V10 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vsx1Q91V10 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.84■□□□□ 0.45
Vsx1Q91V10 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.84■□□□□ 0.45
Vsx1Q91V10 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vsx1Q91V10 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vsx1Q91V10 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Vsx1Q91V10 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vsx1Q91V10 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vsx1Q91V10 AA414768-201ENSMUST00000121924 1257 ntBASIC17.83■□□□□ 0.44
Vsx1Q91V10 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Zfp783-201ENSMUST00000095946 670 ntBASIC17.83■□□□□ 0.44
Vsx1Q91V10 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.83■□□□□ 0.44
Vsx1Q91V10 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.83■□□□□ 0.44
Vsx1Q91V10 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Gm9103-201ENSMUST00000119371 405 ntBASIC17.82■□□□□ 0.44
Vsx1Q91V10 Gm15375-201ENSMUST00000119510 849 ntBASIC17.82■□□□□ 0.44
Vsx1Q91V10 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Gm18032-201ENSMUST00000222541 538 ntBASIC17.82■□□□□ 0.44
Vsx1Q91V10 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vsx1Q91V10 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.82■□□□□ 0.44
Vsx1Q91V10 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Ank2-226ENSMUST00000189368 339 ntBASIC17.81■□□□□ 0.44
Vsx1Q91V10 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms