Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.23■□□□□ 0.67
TraipQ8VIG6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.23■□□□□ 0.67
TraipQ8VIG6 Gm15565-201ENSMUST00000118890 427 ntBASIC19.23■□□□□ 0.67
TraipQ8VIG6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.23■□□□□ 0.67
TraipQ8VIG6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TraipQ8VIG6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.22■□□□□ 0.67
TraipQ8VIG6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.22■□□□□ 0.67
TraipQ8VIG6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.22■□□□□ 0.67
TraipQ8VIG6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TraipQ8VIG6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.21■□□□□ 0.67
TraipQ8VIG6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TraipQ8VIG6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.2■□□□□ 0.66
TraipQ8VIG6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.2■□□□□ 0.66
TraipQ8VIG6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TraipQ8VIG6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Gm10418-201ENSMUST00000100943 576 ntBASIC19.19■□□□□ 0.66
TraipQ8VIG6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.19■□□□□ 0.66
TraipQ8VIG6 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.19■□□□□ 0.66
TraipQ8VIG6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TraipQ8VIG6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Gm13836-201ENSMUST00000121159 501 ntBASIC19.18■□□□□ 0.66
TraipQ8VIG6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Gm3375-201ENSMUST00000203929 796 ntBASIC19.18■□□□□ 0.66
TraipQ8VIG6 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
TraipQ8VIG6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TraipQ8VIG6 Tgds-204ENSMUST00000228543 1594 ntBASIC19.18■□□□□ 0.66
TraipQ8VIG6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms