Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rab40bQ8VHP8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab40bQ8VHP8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab40bQ8VHP8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab40bQ8VHP8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gm8493-201ENSMUST00000196881 489 ntBASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40bQ8VHP8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40bQ8VHP8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms