Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpa1Q8VEE4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpa1Q8VEE4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpa1Q8VEE4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpa1Q8VEE4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpa1Q8VEE4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gm12251-201ENSMUST00000117893 792 ntBASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gm8969-201ENSMUST00000199694 526 ntBASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpa1Q8VEE4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms