Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.6■□□□□ 0.41
Q8VDP2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Q8VDP2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.6■□□□□ 0.41
Q8VDP2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q8VDP2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Q8VDP2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Q8VDP2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Q8VDP2 Gm14117-201ENSMUST00000122417 843 ntBASIC17.59■□□□□ 0.41
Q8VDP2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q8VDP2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q8VDP2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q8VDP2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
Q8VDP2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.41
Q8VDP2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q8VDP2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q8VDP2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q8VDP2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Q8VDP2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.58■□□□□ 0.4
Q8VDP2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.58■□□□□ 0.4
Q8VDP2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Q8VDP2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Q8VDP2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q8VDP2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q8VDP2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.57■□□□□ 0.4
Q8VDP2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q8VDP2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.57■□□□□ 0.4
Q8VDP2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Q8VDP2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8VDP2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Q8VDP2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.56■□□□□ 0.4
Q8VDP2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Gm9959-201ENSMUST00000068277 390 ntBASIC17.56■□□□□ 0.4
Q8VDP2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Q8VDP2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.56■□□□□ 0.4
Q8VDP2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8VDP2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms