Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf8Q8VC56 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf8Q8VC56 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf8Q8VC56 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf8Q8VC56 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Gm7514-201ENSMUST00000209475 934 ntBASIC17.37■□□□□ 0.37
Rnf8Q8VC56 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf8Q8VC56 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf8Q8VC56 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Gm13534-201ENSMUST00000121169 513 ntBASIC17.35■□□□□ 0.37
Rnf8Q8VC56 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms