Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps39Q8R5L3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Fst-202ENSMUST00000223640 2612 ntBASIC18.09■□□□□ 0.49
Vps39Q8R5L3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vps39Q8R5L3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.49
Vps39Q8R5L3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps39Q8R5L3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vps39Q8R5L3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps39Q8R5L3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps39Q8R5L3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps39Q8R5L3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms