Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna3Q8R4G9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna3Q8R4G9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna3Q8R4G9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna3Q8R4G9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chrna3Q8R4G9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Chrna3Q8R4G9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna3Q8R4G9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms