Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slf1Q8R3P9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slf1Q8R3P9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slf1Q8R3P9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slf1Q8R3P9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slf1Q8R3P9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slf1Q8R3P9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.22■□□□□ 0.51
Slf1Q8R3P9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slf1Q8R3P9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slf1Q8R3P9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slf1Q8R3P9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slf1Q8R3P9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms