Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nup58Q8R332 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.35■□□□□ 0.69
Nup58Q8R332 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.35■□□□□ 0.69
Nup58Q8R332 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 Fst-202ENSMUST00000223640 2612 ntBASIC19.35■□□□□ 0.69
Nup58Q8R332 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup58Q8R332 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.34■□□□□ 0.69
Nup58Q8R332 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.34■□□□□ 0.69
Nup58Q8R332 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nup58Q8R332 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.34■□□□□ 0.69
Nup58Q8R332 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup58Q8R332 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.33■□□□□ 0.69
Nup58Q8R332 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nup58Q8R332 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.33■□□□□ 0.69
Nup58Q8R332 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup58Q8R332 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Gm13234-201ENSMUST00000120010 747 ntBASIC19.33■□□□□ 0.68
Nup58Q8R332 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.33■□□□□ 0.68
Nup58Q8R332 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Nup58Q8R332 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup58Q8R332 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nup58Q8R332 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nup58Q8R332 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.32■□□□□ 0.68
Nup58Q8R332 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nup58Q8R332 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup58Q8R332 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Nup58Q8R332 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup58Q8R332 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nup58Q8R332 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nup58Q8R332 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup58Q8R332 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.31■□□□□ 0.68
Nup58Q8R332 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Nup58Q8R332 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup58Q8R332 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nup58Q8R332 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup58Q8R332 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.3■□□□□ 0.68
Nup58Q8R332 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.3■□□□□ 0.68
Nup58Q8R332 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Nup58Q8R332 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.3■□□□□ 0.68
Nup58Q8R332 Reep4-203ENSMUST00000226563 1444 ntBASIC19.3■□□□□ 0.68
Nup58Q8R332 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.3■□□□□ 0.68
Nup58Q8R332 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup58Q8R332 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nup58Q8R332 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nup58Q8R332 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Tgds-204ENSMUST00000228543 1594 ntBASIC19.29■□□□□ 0.68
Nup58Q8R332 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.29■□□□□ 0.68
Nup58Q8R332 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.29■□□□□ 0.68
Nup58Q8R332 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms