Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nudcd3Q8R1N4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nudcd3Q8R1N4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nudcd3Q8R1N4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nudcd3Q8R1N4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nudcd3Q8R1N4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Tgds-204ENSMUST00000228543 1594 ntBASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms