Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp40Q8R1F9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp40Q8R1F9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp40Q8R1F9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp40Q8R1F9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp40Q8R1F9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Gm15375-201ENSMUST00000119510 849 ntBASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Fst-202ENSMUST00000223640 2612 ntBASIC19.34■□□□□ 0.69
Rpp40Q8R1F9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp40Q8R1F9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.33■□□□□ 0.69
Rpp40Q8R1F9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp40Q8R1F9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Gm10812-201ENSMUST00000099864 546 ntBASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.68
Rpp40Q8R1F9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp40Q8R1F9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp40Q8R1F9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Mir2861-201ENSMUST00000175539 82 ntBASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp40Q8R1F9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp40Q8R1F9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms