Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Flg-201ENSMUST00000050758 1488 ntBASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gm15375-201ENSMUST00000119510 849 ntBASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gm18101-201ENSMUST00000215769 548 ntBASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alms1Q8K4E0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alms1Q8K4E0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Fst-202ENSMUST00000223640 2612 ntBASIC17.67■□□□□ 0.42
Alms1Q8K4E0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Timm23-208ENSMUST00000226683 750 ntBASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alms1Q8K4E0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Gm33142-201ENSMUST00000193913 867 ntBASIC17.65■□□□□ 0.42
Alms1Q8K4E0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.65■□□□□ 0.42
Alms1Q8K4E0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Alms1Q8K4E0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Alms1Q8K4E0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.64■□□□□ 0.42
Alms1Q8K4E0 Zfp783-201ENSMUST00000095946 670 ntBASIC17.64■□□□□ 0.42
Alms1Q8K4E0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Alms1Q8K4E0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alms1Q8K4E0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alms1Q8K4E0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms