Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk3Q8K3G5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk3Q8K3G5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Gm5874-201ENSMUST00000096101 508 ntBASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk3Q8K3G5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Gm13534-201ENSMUST00000121169 513 ntBASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Gm42642-201ENSMUST00000200683 355 ntBASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk3Q8K3G5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk3Q8K3G5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Nespas-201ENSMUST00000143738 1083 ntBASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Vrk3Q8K3G5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms