Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shtn1Q8K2Q9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Iqck-206ENSMUST00000208658 2891 ntBASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shtn1Q8K2Q9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Gm45058-201ENSMUST00000205810 766 ntBASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Shtn1Q8K2Q9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Mir6349-201ENSMUST00000184059 97 ntBASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.28■■□□□ 1
Shtn1Q8K2Q9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Shtn1Q8K2Q9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shtn1Q8K2Q9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Gm9103-201ENSMUST00000119371 405 ntBASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.26■□□□□ 0.99
Shtn1Q8K2Q9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shtn1Q8K2Q9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.24■□□□□ 0.99
Shtn1Q8K2Q9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shtn1Q8K2Q9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shtn1Q8K2Q9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shtn1Q8K2Q9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shtn1Q8K2Q9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms