Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clip4Q8CI96 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clip4Q8CI96 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.15■□□□□ 0.5
Clip4Q8CI96 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clip4Q8CI96 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clip4Q8CI96 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Clip4Q8CI96 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Clip4Q8CI96 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clip4Q8CI96 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Gm13148-201ENSMUST00000118892 745 ntBASIC18.13■□□□□ 0.49
Clip4Q8CI96 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.13■□□□□ 0.49
Clip4Q8CI96 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clip4Q8CI96 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Clip4Q8CI96 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Gm6211-202ENSMUST00000167849 925 ntBASIC18.11■□□□□ 0.49
Clip4Q8CI96 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms