Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 AW822252-206ENSMUST00000208904 237 ntBASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Zc3h3Q8CHP0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3h3Q8CHP0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Zc3h3Q8CHP0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Zc3h3Q8CHP0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3h3Q8CHP0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Zc3h3Q8CHP0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Gm4974-201ENSMUST00000209974 875 ntBASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3h3Q8CHP0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Gm11355-201ENSMUST00000121120 306 ntBASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Gm11950-201ENSMUST00000121615 838 ntBASIC17.67■□□□□ 0.42
Zc3h3Q8CHP0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms