Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox30Q8CGW4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox30Q8CGW4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox30Q8CGW4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sox30Q8CGW4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox30Q8CGW4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sox30Q8CGW4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox30Q8CGW4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox30Q8CGW4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sox30Q8CGW4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox30Q8CGW4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.77■□□□□ 0.76
Sox30Q8CGW4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sox30Q8CGW4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms