Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcpip1Q8CDG3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcpip1Q8CDG3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcpip1Q8CDG3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcpip1Q8CDG3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcpip1Q8CDG3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vcpip1Q8CDG3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vcpip1Q8CDG3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vcpip1Q8CDG3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vcpip1Q8CDG3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.33■□□□□ 0.68
Vcpip1Q8CDG3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms