Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf31Q8CCF0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Gm10138-203ENSMUST00000206952 366 ntBASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf31Q8CCF0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf31Q8CCF0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf31Q8CCF0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf31Q8CCF0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf31Q8CCF0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Gm15375-201ENSMUST00000119510 849 ntBASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf31Q8CCF0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf31Q8CCF0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Gm6576-201ENSMUST00000169678 883 ntBASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf31Q8CCF0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms