Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa4Q8CA71 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.1■□□□□ 0.97
Shisa4Q8CA71 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa4Q8CA71 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Shisa4Q8CA71 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa4Q8CA71 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Gm13158-201ENSMUST00000122007 736 ntBASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.08■□□□□ 0.97
Shisa4Q8CA71 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa4Q8CA71 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa4Q8CA71 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Shisa4Q8CA71 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa4Q8CA71 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.04■□□□□ 0.96
Shisa4Q8CA71 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa4Q8CA71 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms